Step one: Download and install Anaconda
Gurobi supports Python 2.7 and 3.7 for Mac. Choose the version of Anaconda you wish to download:
Download the installer: Miniconda installer for Windows. Anaconda installer for Windows. Verify your installer hashes. Double-click the.exe file. Follow the instructions on the screen. If you are unsure about any setting, accept the defaults. You can change them later. Updating conda ¶ Open your Anaconda Prompt from the start menu. Double-click the downloaded file and click continue to start the installation. Answer the prompts on the Introduction, Read Me, and License screens. Click the Install button to install Anaconda in your /opt directory (recommended): OR, click the Change Install Location button.
Once the download has completed, double click on the downloaded .pkg file and follow the installation instructions. Once the install is complete, and once you close your current terminal and open a new one, typing python in your terminal window should invoke the Anaconda Python interpreter:
quit() in Python to return to the terminal.
- With conda installed, bustools can be downloaded and installed with: conda install -c bioconda bustools. Mac: Linux: Windows.
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Step two: Install Gurobi into Anaconda
The next step is to install the Gurobi package into Anaconda. You do this by first adding the Gurobi channel into your Anaconda platform and then installing the gurobi package from this channel. From an Anaconda terminal issue the following command to add the Gurobi channel to your default search list:
Now issue the following command to install the Gurobi package:
You can remove the Gurobi package at any time by issuing the command:
Step three: Install a Gurobi License
The third step is to install a Gurobi license (if you haven’t already done so). You are now ready to use Gurobi from within Anaconda. Your next step is to launch either the Spyder IDE or Jupyter Notebook.
For more information about using the conda package manager in Anaconda Prompt(terminal on Linux or macOS), see the conda documentation.
You can also use the graphical interfaceAnaconda Navigator to install conda packageswith just a few clicks.
Open an Anaconda Prompt (terminal on Linux or macOS) and follow theseinstructions.
Installing a conda package¶
Enter the command:
Installing specific versions of conda packages¶
Include the desired version number or its prefix after the package name:
To specify only a major version, run:
These commands install into the environment that is currently active. Toinstall into a named environment, run:
If the package is specific to a Python version, conda uses the versioninstalled in the current or named environment. For details on versions,dependencies and channels, seeConda FAQ andConda Troubleshooting.
Installing packages on a non-networked (air-gapped) computer¶
To directly install a conda package from your local computer, run:
Conda Download Package
Conda installs packages into the
To install a .tar file containing many conda packages, run the following command:
If conda cannot find the file, try using an absolute path name instead of a relative path name.
Conda Download Too Slow
Installing packages directly from the file does not resolve dependencies. If your installed package does not work, it may have missing dependencies that need to be resolved manually.